OK, that makes sense.
Is there a better way to update a modded MC server? i.e. doing it from the web ui rather than having to putty in and run the server, then chown the files then copy the files across to the live folder etc etc? Or am I stuck with following a 20 point step process using 5 different programs. (Yes I’m exaggerating to make a point, that being its a painfully long process for upgrading a modded MC server atm).