Magma 1.12.2 don't start up after reboot

Having trouble with restarting server. When I execute the stop in WebUI it don’t stop, I need to use Kill. If I run Stop in game server stops. Either way I stop server it take 100’s of times of starting it before someone can log into it? I know Magma is a young server platform but I like the option of paper and forge mix so I can tie all my servers together better.